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CellBrite® NIR Cytoplasmic Membrane Dyes

Biotium’s CellBrite® NIR Cytoplasmic Membrane Dyes are ready-to-use dye stock solutions that can be added directly to normal culture media to uniformly label cell membranes with near-infrared lipophilic dyes.

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Product Description

Biotium’s CellBrite® NIR Cytoplasmic Membrane Dyes are unique near-infrared lipophilic carbocyanine dyes for labeling cytoplasmic membranes in live or formaldehyde-fixed cells.

  • Novel, near-IR lipophilic carbocyanine dyes
  • Long-lasting staining with low toxicity and minimal dye transfer
  • Useful for cell tracing, tracking, and transplantation studies
  • Formaldehyde-fixable
  • Stain live cells in culture medium, or stain formaldehyde-fixed cells

Carbocyanine dyes label cytoplasmic membranes and intracellular membrane structures efficiently and permanently. They have been used as tracers in cell–cell fusion, cellular adhesion, and migration applications due to their properties of low cytotoxicity and high resistance to intercellular transfer. However, the lipophilic nature of these dyes pose an obstacle to uniform cellular labeling. Although structurally related PKH dyes have been developed and optimized for cell labeling, the procedure requires multiple steps and subjects cells to an iso-osmotic mannitol loading medium.  A variety of carbocyanine dyes with different optical properties are available, allowing cell populations to be marked with distinct fluorescent colors for identification after mixing. Double labeling can identify cells that have fused or formed stable clusters.

CellBrite® NIR Cytoplasmic Membrane Dyes are novel near-infrared carbocyanine dyes for labeling the cytoplasmic membranes of living cells. Due to their long emission wavelengths, near-infrared cell membrane stains can be used to label cells for near-infrared small animal imaging studies for non-invasive imaging of cell migration and cell homing. The dyes have long 18-carbon hydrophobic tails and an additional water-soluble group. These unique chemical structure elements make the dyes easy to dissolve while providing highly stable cytoplasmic membrane staining, unlike traditional carbocyanine dyes like DiI, DiO, and DiR, which are often difficult to dissolve or prone to precipitation during cell staining.

CellBrite® NIR Cytoplasmic Membrane Dyes are available in the following colors: NIR680, NIR750, NIR770, and NIR790. Biotium offers other CellBrite® Cytoplasmic Membrane Stains in a variety of colors.

Find the Right Stain for Your Application

CellBrite® NIR dyes can be used to stain live cells or formaldehyde-fixed cells. Live cells can be fixed in formaldehyde after staining as well, but the staining has poor tolerance for methanol fixation or detergent permeabilization. However, permeabilizing fixed cells before staining with CellBrite® NIR dyes can give good results. For membrane stains that withstand fixation with either formaldehyde or methanol, as well as detergent permeabilization after staining, see our CellBrite® Fix Membrane Stains and MemBrite® Fix Cell Surface Staining Kits. For more information, download the product information sheet, or see Frequently Asked Questions.

CellBrite® NIR dyes do not stain yeast or bacteria. See our Cellular Stains Table for more information on how our dyes stain various organisms.

CellBrite® NIR dyes are non-toxic and stain cells very stably. They can be used to track cells for days to weeks. However, over time the dyes will be internalized by endocytosis, resulting in labeling of intracellular vesicles. By 24 hours after staining, the dyes will no longer outline the plamsa membrane, but will be localized inside the cell. For long-term visualization of cell morphology in culture, our stable, non-toxic ViaFluor® SE Cell Proliferation Kits may be a more suitable alternative. ViaFluor® SE dyes covalently label cells throughout the cytoplasm and can be tracked for several days or longer by microscopy or flow cytometry. See our Tech Tip: Using ViaFluor® SE Stains for Cell Tracing and Co-Culture to learn more.

CellBrite® NIR Dyes can be used to stain formaldehyde-fixed cells, but the staining has poor tolerance for methanol fixation or detergent permeabilization. However, permeabilizing fixed cells before staining with CellBrite® Dyes can give good results, see our Tech Tip: Combining Lipophilic Membrane Dyes with Immunofluorescence. For staining formaldehyde-fixed cells we strongly recommend using CytoLiner™ Fixed Cell Membrane Stains which offer more robust and consistent results over the CellBrite® Cytoplasmic Membrane Dyes.

Product Information

Catalog No.Membrane DyeAbs/Em
30070CellBrite® NIR680 683/724 nm
30077CellBrite® NIR750 748/780 nm
30078CellBrite® NIR770767/806 nm
30079CellBrite® NIR790786/820 nm
References

Download a list of curated CellBrite® and MemBrite® references.

Product Attributes

Size
100 uL
Probe cellular localization
Membrane/cell surface, Membrane/vesicular
Dye
CellBrite® NIR680, CellBrite®NIR750, CellBrite®NIR770, CellBrite®NIR790
For live or fixed cells
For fixed cells, For live/intact cells
Assay type/options
Co-cultures, Extended staining (several days to weeks)
Fixation options
Fix before staining (formaldehyde), Fix after staining (formaldehyde), Permeabilize before staining
Colors
Near-infrared
Storage Conditions
Store at room temperature, Protect from light

Documents, Protocols, SDS and COA

FAQs

CellBrite® & MemBrite® Membrane & Cell Surface Stains

While CellBrite® Cytoplasmic Membrane Dyes can stain formaldehyde-fixed cells, they generally do not give good results in cryosections, possibly because the cell membrane integrity is disrupted, exposing other membrane structures to the dyes. Some customers have reported success using these dyes with vibratome sections.

CellBrite® Cytoplasmic Membrane Dyes are not suitable for membrane staining in FFPE samples as membrane lipids are extracted during the dewaxing and rehydration process. Similarly, acetone or methanol fixation of cryosections will extract lipids, leading to poor staining.

CellBrite® Fix, MemBrite® Fix, and CellBrite® Steady are recommended for use on live cells only. In fixed cells or sections they will label intracellular structures.

In some tissue types, lectins such as CF® Dye WGA Conjugates, CF® Dye Concanavalin A Conjugates, or CF® Dye PNA Conjugates may be useful for staining cell boundaries in FFPE or frozen sections. However, the staining pattern of lectins is highly dependent on cell and tissue type, so we recommend consulting the literature before trying these stains for your tissue of interest.

Alternatively, immunostaining using cell surface-specific antibodies could be done.

So far we have not found a universal plasma membrane stain for tissue sections. This is an application of interest to us and our customers, so we are working to find new solutions.

 

CellBrite® Cytoplasmic Membrane Dyes are too prone to aggregation to efficiently stain EVs. Some of the CellBrite® Fix, MemBrite® Fix, and CellBrite® Steady dye options have been reported for this application, however we do not recommend them. For optimal staining of exosome membranes we recommend our ExoBrite™ True EV Membrane Stains, which are novel lipophilic membrane dyes specifically designed and optimized for efficient staining of EV membranes with minimal dye aggregation. See our Extracellular Vesicle Research page for more information about our complete line of EV stains and antibodies.

Lipophilic carbocyanine dyes like CellBrite® and CellBrite® NIR Cytoplasmic Membrane Dyes can be used to stain formaldehyde-fixed cells. Fixation with methanol or other solvents is not recommended. Permeabilization with detergents after staining will extract the dyes and alter the staining pattern. However, we’ve seen good results when formaldehyde-fixed cells are permeabilized before staining with CellBrite® dyes (See Tech Tip: Combining Lipophilic Membrane Dyes with Immunofluorescence).

CellBrite® Fix, MemBrite® Fix, and CellBrite® Steady cannot be used to stain the plasma membrane of fixed samples; these dyes will primarily stain intracellular structures in cells that are already fixed.

To find the right dye for your workflow, see our Comparison of Membrane & Cell Surface Stains, or download our Membrane & Surface Stains Brochure.

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