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A kit designed to perform viability PCR on E. coli O157:H7. It contains a viability PCR dye (PMAxx™ or PMA) and primers to amplify the Z3276 gene.
This kit is designed to perform viability PCR on E. coli O157:H7. It contains a viability PCR dye (PMA or PMAxx™) and primers to amplify the Z3276 gene.
E. coli O157:H7 is a pathogenic strain of Escherichia coli bacteria. Often a food-borne pathogen, it can cause digestive illness. PMA-based viability PCR to detect E. coli O157:H7 has been reported using the primers provided in the kit, and ORF Z3276 was shown to be specific for strain O157:H7 . These primers have been validated at Biotium for real-time qPCR using Forget-Me-Not™ EvaGreen® qPCR Master Mix. For pan-E. coli primers to detect other strains of E. coli besides O157:H7, please see kit 31050.
To learn more about the advantages of determining bacterial viability using viability PCR, visit the Viability PCR Technology Page.
| Bacteria Strain | Gene name | Kit with PMA (catalog #) | Kit with PMAxx™ (catalog #) |
|---|---|---|---|
| Salmonella enterica | invA | 31033 | 31033-X |
| Mycobacterium tuberculosis | groEL2 | 31034 | N/A |
| Staphylococcus aureus | nuc | 31035 | N/A |
| MRSA | mecA | 31036 | N/A |
| E. coli O157:H7 | Z3276 | 31037 | 31037-X |
| E. coli | uidA | 31050 | 31050-X |
| Listeria monocytogenes | hly | 31051 | 31051-X |
| Legionella pneumophila | mip | 31053 | N/A |
Don’t see your favorite strain? Let us know at techsupport@biotium.com.
Download PMA and PMAxx™ References and a list of PMA and PMAxx™ Validated Bacterial Strains.
Note: Do not remove the cover or introduce liquids to the interior of the PMA-Lite.
The LEDs in the PMA-Lite™ and PMA-Lite™ 2.0 have a wavelength that is 465-475 nm and a brightness of approximately 600-800 millicandela (mcd). These are nominal values provided for reference use only, individual LED wavelength and brightness are not a calibrated specifications for the device.
There are three LEDs in each well (one bottom, two side) that provide illumination around each sample tube for efficient photoactivation.
The illumination in each well on the PMA-Lite far exceeds what is required for photocrosslinking of the viability dyes EMA, PMA, or PMAxx™ to nucleic acids. Therefore, any variability in brightness of the PMA-Lite LEDs should not significantly affect the v-PCR results. If performance verification is required, we recommend doing a functional PMA-PCR assay to verify that PMA-treated samples photoactivated in the device give qPCR results within an acceptable range. Mixing the samples during photoactivation and using longer illumination times may be necessary if the samples are complex and not fully transparent to light.
For other related FAQs, see Is illumination even across all positions in the PMA-Lite™ device? and Can I use PMA or PMAxx™ with environmental samples?
PMA is stable after dilution to 0.2 mM in water as long as it is protected from light and can be stored in the same way as the 20 mM stock solution.