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CF® Dye & Other Bioconjugates

Calcium-dependent cell marker that binds to phosphatidylserine (PS) for real-time apoptosis monitoring.
Acetylcholine receptor probe that labels neuromuscular junctions with dye options for super-resolution and 2-photon imaging.
Probes used to label cell surfaces, track endocytic vesicles, image recycling endosomes, and as a retrograde neuronal tracer.
Con A, WGA, PNA, and other lectins for fixable staining of cell surface glycoproteins.
Fluid phase markers used to track permeability, protein uptake, and the trafficking of endocytic cargo to lysosomes.
Labeled nucleotides for probe synthesis, TUNEL assays, or receptor probes, available in a wide variety of colors.
Reliable and long-lasting F-Actin stains to visualize cytoskeleton via microscopy in fixed cells and tissues.
A wide variety of biotinylated probes and fluorescent bioconjugates of streptavidin, biotin, and biocytin.
Antibodies conjugated with our superior CF® Dyes and other labels, including widely published clones against common targets.

Annexin V Apoptosis Probes

Annexin V is a protein with high affinity for phosphatidylserine (PS). During apoptosis, PS is translocated from the inner to the outer leaflet of the plasma membrane, where it can be stained by Annexin V conjugates. We offer Annexin V labeled with CF® Dyes and other labels, and in Annexin V kits with other apoptotic or necrotic cell stains.

Annexin staining is calcium-dependent, and is traditionally performed in an optimized Annexin binding buffer. Annexin conjugates also can be used to stain cells in culture medium for real-time apoptosis monitoring. Annexin can be fixed with formaldehyde after staining as long as calcium is included in all buffers. However, Annexin staining cannot be performed on fixed cells or tissues. For fixed cell apoptosis stains, see our TUNEL Assays.

Apoptotic HeLa cells stained with NucView 488 caspase-3 substrate (green) and CF594 Annexin V (red).
RedDot™ 1 (red) in live HeLa. Apoptotic cells are stained with NucView® 405 (blue) and CF®488A Annexin V (green).

Annexin V Conjugates

ProductFeatures
Annexin V Conjugates• Wide selection of CF® dyes, R-PE, biotin, and other labels
• 50 ug/mL in 10 mM Tris, 1 mM EDTA, 30 mM NaCl, 1 mg/mL bovine serum albumin, 0.1% sodium azide, pH 7.5
CF® Dye Annexin V Conjugates, Azide Free, Lyophilized• Azide-free for no-wash, real-time live cell imaging in culture medium
• Choice of twelve CF® dyes
Near-IR CF® Dye Annexin V• Lyophilized, preservative-free
• Choice of five near-IR CF® dyes
Annexin V (His Tag)• Recombinant Annexin V with or without His Tag expressed from E.coli
5X Annexin Binding Buffer• Concentrated buffer optimized for Annexin V binding

Alpha-Bungarotoxin Neuromuscular Junction Probes

Alpha-bungarotoxin is a polypeptide snake toxin that binds to the nicotinic acetylcholine receptor found at the neuromuscular junction with high affinity. Fluorescent alpha-bungarotoxin can be used for labeling of nicotinic acetylcholine receptors at neuromuscular junctions in tissue sections. Alpha-bungarotoxin may also be used for detection of GABA A receptor subsets in cells, or for labeling recombinant proteins that express the alpha-bungarotoxin binding site (BBS) epitope tag.

We offer α-bungarotoxin conjugated to a wide selection of CF® Dyes and other labels, as well as unconjugated α-bungarotoxin.

  • Choose from 9 bright and stable CF® Dye colors or other labels
  • Dye options for super-resolution and 2-photon imaging

Neuromuscular junction endplate in rat skeletal muscle cryosection stained with CF®594 α-bungarotoxin (red). Nuclei are stained with DAPI.
Neuromuscular junction in a section of rat skeletal muscle stained with CF®633 α-bungarotoxin (magenta). Nuclei are stained with DAPI (cyan).

α-Bungarotoxin Conjugates

ProductFeatures
CF® Dye & Other α-Bungarotoxin Conjugates• Choice of popular CF® dye colors or a selection of classic fluorophores
Biotin-XX-α-Bungarotoxin• Biotinylated α bungartoxin
α-Bungarotoxin• Unconjugated α-bungarotoxin, potent inhibitor of the motor endplate acetylcholine receptor

Cholera Toxin & Transferrin Conjugates

Cholera Toxin Subunit B Conjugates

Cholera toxin subunit B binds to ganglioside GM1 in lipid rafts on the plasma membrane. Cholera toxin subunit B is reported to be internalized by clathrin-dependent and independent pathways depending on cell type. We offer cholera toxin subunit B conjugated to a selection of CF® Dyes. The conjugates can be used to label lipid rafts on the cell surface, track endocytic vesicles, and as a retrograde neuronal tracer.

HeLa cells were surface labeled with CF®488A cholera toxin B (green) at 4°C, then fixed, permeabilized, and stained with DAPI (blue).
U87-MG cells were incubated with CF®680R transferrin (red), CF®488A dextran (green), and Hoechst 33342 (blue) for 30 minutes at 37°C, washed and imaged.

Transferrin Conjugates

Transferrin delivers iron to vertebrate cells. After binding to its cell surface receptor, transferrin is internalized and the acidic environment in endocytic vesicles favors dissociation of iron from the transferrin-receptor complex. Following iron release, the apotransferrin is recycled to the plasma membrane and released from its receptor to scavenge more iron. We offer human transferrin labeled with CF® Dyes for imaging recycling endosomes.

Cholera Toxin & Transferrin Conjugates

ProductFeatures
CF® Dye Cholera Toxin• Binds lipid rafts, can be used as endocytosis probe or neuronal retrograde tracer
• Available with a large choice CF® dye colors
Cholera Toxin Subunit B (Recombinant)• Purified from E. coli as a single, non-glycosylated polypeptide chain
• Free of stabilizers and ready to conjugate.
CF® Dye Human Transferrin• Trace recycling endosomes
• Available with a selection of popular CF® dye colors

Carbohydrate-Binding Lectins

Biotium’s CF® Dye Lectin Conjugates offer bright, photostable labeling for clear visualization of cell-surface glycans and tissue structures. Concanavalin A (Con A) and wheat germ agglutinin (WGA) can be used to selectively stain the cell surface of live cells, and withstand fixation and permeabilization. When cells are fixed and permeabilized before staining, fluorescent lectins stain both cell surface and organelles in the secretory pathway. WGA also is a live cell Gram stain for bacteria, while Concanavalin A and WGA conjugates can be used to stain cell wall and bud scars in yeast. See our Microbiology Technology Page for more information.

Biotium also offers Peanut Agglutinin (PNA) for β-galactose, Tomato Lectin (LEL/TL) for vasculature staining, Ulex Europaeus Agglutinin I (UEA I) for staining endothelial cells, Datura Stramonium Lectin (DSL) for GlcNAc oligomers, Sambucus Nigra Lectin (SNA) for sialic acid, and Phaseolus Vulgaris Leucoagglutinin (PHA-L) for stimulating lymphocyte and T cell proliferation. These conjugates are ideal for live or fixed cell staining, glycan profiling, microbiology, and labeling blood vessels or microglia in tissue sections.

View Biotium’s full selection of lectin CF® Dye conjugates below.

Live HeLa cells stained with CF® 594 Con A (red) and Hoechst 33342 (blue) for 10 minutes at 37°C, then washed and imaged.
S. cerevisiae stained with CF®594 Con A (red) and CF®488A WGA (green).
E. coli and Salmonella co-culture stained with DAPI (blue) and CF®633 WGA (red).
Staining of rat brain cryosection with CF®488A LEL, TL.

Lectin Conjugates

ProductFeatures
CF® Dye Concanavalin A (Con A)• Cell surface stain for yeast, fungi, and mammalian cells
• Selectively binds to a-mannopyranosyl and a-glucopyranosy residues
• Available with a wide selection of CF® Dyes
CF® Dye Wheat Germ Agglutinin (WGA)• Cell surface stain for mammalian cells and gram+ bacteria
• Also stains yeast bud scars
• Has high affinity for sialic acid and N-acetylglucosamine
• Choose from a wide selection of CF® Dyes or HRP
CF® Dye Peanut Lectin (PNA) from Arachis hypogaea• Specific for terminal β-galactose and binds preferentially to galactosyl (β-1,3) N-acetylgalactosamine
• Choice of 4 CF® dye colors
CF® Dye Lycopersicon Esculentum (Tomato) Lectin (LEL, TL)• Marker for blood vessels and microglial cells
• Binds to [GlcNAc] 1,3-N-acetylglucosamine, glycophorin, and Tamm-Horsfall glycoprotein
• Used to study tumor angiogenesis or tracing neovascular development in xenograft models
• Choice of 5 CF® Dyes or biotin
CF® Dye Ulex Europaeus Agglutinin I (UEA I)• Marker for human endothelial cells and incompletely differentiated gastrin cells
• Binds to glycoproteins and glycolipids containing α-linked fucose residues
• Choice of 5 CF® Dyes or biotin
CF® Dye Phaseolus Vulgaris Leucoagglutinin (PHA-L)• Used to stimulate lymphocyte and T cell proliferation
• Choice of 5 CF® Dyes or biotin
CF® Dye Datura Stramonium Lectin (DSL)• Binds to (beta-1,4) linked N-acetylglucosamine oligomers
• Choice of 5 CF® Dyes or biotin
CF® Dye Sambucus Nigra Lectin (SNA, EBL))• Binds to sialic acid attached to terminal galactose
• Choice of 6 CF® Dyes or biotin

Dextran, BSA, & Hydrazide Fluid Phase Tracers

Dextrans are water soluble branched-chain polysaccharides. Fluorescently labeled dextrans are used as markers for trafficking of fluid phase endocytic cargo to lysosomes, tracers for epithelial and endothelial permeability, and tracers for neuronal morphology. Biotium offers CF® Dye Dextrans in a variety of molecular weights from 10,000 to 250,000.

Note: Formaldehyde fixation preserves the localization of dextrans in endosomes, but the labeling generally cannot tolerate detergent permeabilization.

Live HeLa cells incubated with CF®568 Dextran 10,000 MW (red), showing accumulation of the probe in endosomes.

CF® Dye Bovine Serum Albumin (BSA) also can be used as a tracer for protein uptake and permeability.

CF® Dye Hydrazides are water soluble dyes that can be used as microinjected cytoplasmic tracers or fluid-phase markers. Hydrazides also can be used for labeling aldehyde or ketone groups, such as carbohydrate molecules after peroxidation with periodate. However, for this application we recommend using CF® Dye aminooxy forms, which are more reactive toward these groups than hydrazide forms. For 2D-DIGE platform, we recommend CFDI hydrazides. Also see our full selection of polar tracer dyes.

CF® Dye Dextrans

ProductConjugates
CF® Dye Dextran, 3500 MWUV-excitable CF®350
CF® Dye Dextran, 10,000 MWAvailable with a wide selection of CF® Dye colors
CF® Dye Dextran, 40,000 MWGreen fluorescent CF®488A,
near-IR CF®680, CF®750 or CF®770
CF® Dye Dextran, 70,000 MWBlue fluorescent CF®350,
Green fluorescent CF®488A,
Far-red fluorescent CF®633,
near-IR CF®680, CF®750 or CF®770
CF® Dye Dextran, 150,000 MWGreen fluorescent CF®488A,
near-IR CF®680, CF®750 or CF®770
CF® Dye Dextran, 250,000 MWGreen fluorescent CF®488A,
near-IR CF®680, CF®750 or CF®770
Don't see the color you're looking for? Contact us and let us know, we regularly add new conjugates to our catalog on request.

CF® Dye BSA

ProductConjugates
CF® Dye BSAGreen fluorescent CF®488A, red fluorescent CF®594, far-red fluorescent CF®640R, or near-IR fluorescent CF®680

CF® Dye Hydrazides

ProductFeatures
CF® Dye Hydrazide• Fixable polar tracers
• Wide selection of bright, photostable, and highly soluble CF® dye colors

dUTP, cAMP, & Other Labeled Nucleotides

Labeled Nucleotides

Labeled nucleotides can be used to synthesize labeled DNA probes that are commonly used for in situ hybridization and nucleic acid blotting applications. Biotium offers a large selection of labeled nucleotides, including nucleotides conjugated to CF® Dyes, other fluorophores, and biotin, and our biotinylated nucleotides are available with a variety of linker lengths.

Common applications of specific labeled nucleotides include:

  • Labeled dUTP: TUNEL assays (also see our CF® Dye TUNEL Assay Kits)
  • Aminoallyl nucleotides: introduce free amine groups into probes for subsequent labeling with reactive dyes or biotin
  • Bromine and digoxygenin (DIG) labeled nucleotides: detected using specific antibodies
  • Bromo-deoxyuridine (BrdU): monitor DNA synthesis in cells (see our anti-BrdU antibodies)
  • Fluorescently-labeled cAMP analogs: image cAMP bound to the cAMP receptor on the surface of Dictyostelium cells
Interphase profiling of human chromosome 1 using a selection of Biotium’s dUTP conjugates. Image courtesy of Ramesh Babu, InteGen LLC. See the highlighted citat... See More

Labeled Nucleotides

ProductFeatures
CF® Dye Nucleotides• dUTP, dCTP, UTP, and other nucleotides
• For probe labeling, TUNEL assay with labeled dUTP, and other applications
• Available with a large choice of CF® dye colors
Other Fluorescent Nucleotides• dUTP and other nucleotides with classic fluorescent dyes
Biotinylated Nucleotides• Biotinylated nucleotides for RNA or DNA probe synthesis with a variety of linker lengths
Bromine & DIG Labeled Nucleotides• BrdU, DIG-dUTP, and other nucleotides for detection with specific antibodies
Aminoallyl Nucleotides• For generating amine-functionalized probes for subsequent labeling with amine-reactive dyes or biotin
Labeled cAMP analogs• cAMP receptor probes
• Available with CF® dyes, other fluorophores, or biotin

Phalloidin Conjugates for F-Actin Staining

F-actin Staining in Fixed Cells with No Fading

Fluorescent phalloidins are widely used to stain F-actin in fixed cells and tissues, but traditional dye conjugation can weaken their binding, resulting in dim, short-lived staining. ActinBrite™ High Affinity Phalloidin Conjugates overcome this by maintaining strong F-actin binding, providing bright, stable staining that lasts for over a month-making delayed imaging more reliable.

Features

  • Novel phalloidin conjugates that preserve strong F-actin binding
  • Enables sample storage for 1+ month, depending on conjugate
  • Offered in 7 colors from green to near-IR for easy multiplexing
  • Direct replacements for any phalloidin conjugate
PFA-fixed, Triton® X-100 permeabilized HeLa cells were stained with ActinBrite™ High Affinity Phalloidins or the leading competitor dye phalloidins with spectra... See More

Biotium also offers phalloidin conjugates with a wide selection of CF® Dyes in addition to traditional dyes and biotin. A number of our CF® Dyes have been validated in super-resolution imaging by STORM, STED, SIM, and other methods.

Phalloidin conjugates are not cell-permeant, and are typically used to stain fixed and permeabilized cells. However, they also can be loaded into live cells via cationic liposomes. For live cell cytoskeletal staining, we also offer ViaFluor® Live Cell Microtubule Stains.

Phalloidin Conjugates

ProductFeatures
ActinBrite™ High Affinity Phalloidin Conjugates• Novel phalloidin conjugates with high F-actin binding affinity
• Allows stained samples to be stored for over a month depending on the conjugate
• Available in 5 colors from green to near-IR
Phalloidin Conjugates• Wide selection of CF® dyes, classic fluorophores, and biotin
• Low cost trial sizes available for CF® dye phalloidins

Fluorescent Streptavidin Conjugates

Streptavidin is a bacterial protein with four biotin binding sites that binds biotin with extremely high affinity. Streptavidin conjugates are used in many applications to detect biotinylated antibodies or other targets, or to prepare multivalent complexes of biotinylated molecules. Our streptavidin conjugates are high quality streptavidin labeled with a wide selection CF® Dyes and other labels. Also see our Monoclonal Anti-Biotin Conjugates.

ProductFeatures
Streptavidin Conjugates• High affinity biotin-binding protein
• Wide selection of CF® dyes and other labels

Biotin Bioconjugates & Fluorescent Biotin

We provide a wide variety of biotin bioconjugates for detection with streptavidin conjugates or anti-biotin antibodies (see above). Also see primary and secondary antibodies available as biotin conjugates. We also offer the Biotin SE Protein Labeling Kit and Mix-n-Stain™ Biotin Antibody Labeling Kit, so you can label your own conjugates.

We also offer fluorescent biotins and biocytin. Potential applications of fluorescent biotin include detection of biotin binding sites and the degree of biotinylation of proteins, and for the measurement of avidin and streptavidin in crude biological samples. Biocytin is biotin with a fixable amine group. Fluorescent biocytin can be used as a polar tracer by microinjection to study the morphology of cells. See our full selection of polar tracers.

Biotin Conjugates

ProductFeatures
Biotin-XX-α-Bungarotoxin• Motor endplate acetylcholine receptor probe for neuromuscular junctions
Biotin-Annexin V• Phosphatidylserine-binding protein for labeling apoptotic cells
Biotin-XX-Phalloidin• F-actin probe for fixed cells
Biotin Nucleotides• Selection of nucleotides for probe synthesis or TUNEL assay
Biotin-DHPE• Biotinylated phospholipid
Biotin-cAMP• Biotinylated cAMP receptor probe
Biotin-cGMP• Biotinylated cGMP receptor probe
Biotin NTA• For sensitive detection of His-tagged proteins
CF® Dye Biotin• Fluorescent biotin
• Available with red fluorescent CF®568 or far-red fluorescent CF®633 or CF®640R
CF® Dye Biocytin• Fixable biotin polar tracer
• Available with green fluorescent CF®488A, red fluorescent CF®568, deep-red fluorescent CF®594, or far-red fluorescent CF®640R
Other Fluorescent Biotin• Biotin & biocytin coupled to FITC, rhodamine, AM3-25 membrane dye, and others

Methotrexate Conjugates

Methotrexate is a cytotoxic agent used as a chemotherapeutic and immunosuppressant. It is actively taken up by cells and binds to and inhibits dihydrofolate reductase, thereby inhibiting folic acid metabolism and inducing cell cycle arrest. Methotrexate fluorescein is useful for studying antimetabolite resistance and spontaneous gene amplification. Other dye conjugates of methotrexate may not be transported into cells, but may have other applications for studies of drug binding. Biotium offers methotrexate conjugated to a selection of CF® Dyes or fluorescein.

View Product Page

FAQs

Dyes that carry multiple negative charges can introduce background. Usually, this is more of a concern with labeled antibodies that carry many dyes, as opposed to a small toxin like bungarotoxin. When staining tissues, the endogenous autofluorescence of the tissue itself is often the most significant source of background. Endogenous fluorescence background in tissue is usually highest in the blue wavelengths (DAPI channel) and lowest in the far-red (Cy®5 channel). Our CF®633 bungarotoxin (catalog no. 00009) is a far-red conjugate for the Cy®5 channel with a low negative charge that should have low background from either the dye or autofluorescence.

We test fluorescent bungarotoxin on rat skeletal muscle sections. While the tissue shows autofluorescence, the bungarotoxin staining of motor endplates is usually much brighter than the background for all of the dye colors we’ve tested.  However, if you are staining human tissue (especially brain), lipofuscin autofluorescence may be bright in all channels. This usually shows up as bright, punctate dots around cell nuclei. While we would usually recommend our TrueBlack® lipofuscin quenchers for human brain tissue, they are not compatible with bungarotoxin staining. We have, however, found that EverBrite TrueBlack® Mounting Medium (cat. no. 23017) can be used to mount skeletal muscle sections stained with bungarotoxin.

Cy Dye is a registered trademark of Cytiva.

The binding buffer is an isotonic buffer containing calcium, which is essential for the binding of Annexin V to phosphatidylserine.

The Annexin V protein that we use is a recombinant protein made in E. coli.

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